Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11699172_11700335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11699172 - 11700335

Intron Length:

1164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCTTC

5'SS Class:

major

3'SS Sequence:

CCCGTCCCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAG

U12 Branch Point Sequence:

GGGTGCTGAGCC

Flanking Amino Acid:

RKQAQKIIQKGISRLDDQIF

Intron Amino Acid Position:

900

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

69.2

38.5

Major BPS

52.2

0.06

1.6

51.1

46.3

Major PPT

73.4

0.53

0.8

69.1

31.5

Minor 5ss

42.5

-0.8

50.6

46.1

Minor BPS

44.5

-0.4

2.1

53.03

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038032

11676462 - 11784807

108346

ENSAPLT00000034967

11676462 - 11784807

108346

ENSAPLT00000012356

11676462 - 11784807

108346