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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11721253_11721688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11721253 - 11721688

Intron Length:

436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGAGAG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTGGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

TCCTGTTTAAGC

Flanking Amino Acid:

SLQNLSLNEESGSSVAFSPG

Intron Amino Acid Position:

639

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

68.1

37.1

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

85.6

0.8

0.9

84.2

30.7

Minor 5ss

32.2

-2

3.4

42.9

44.4

Minor BPS

49.7

-0

2.1

60.93

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038032

11676462 - 11784807

108346

ENSAPLT00000034967

11676462 - 11784807

108346

ENSAPLT00000012356

11676462 - 11784807

108346