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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11772269_11779392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11772269 - 11779392

Intron Length:

7124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATCA

5'SS Class:

strong_major

3'SS Sequence:

TTGGTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAC

U12 Branch Point Sequence:

CACCACGTAATT

Flanking Amino Acid:

FALQREQELEVAAINPNHPL

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

27.7

Major BPS

73.5

0.58

0.9

75.4

28.3

Major PPT

75.5

0.57

73.4

41.9

Minor 5ss

32.8

-2

39.5

45.9

Minor BPS

44.9

-0.3

2.1

59.2

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011777

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038032

11676462 - 11784807

108346

ENSAPLT00000034967

11676462 - 11784807

108346

ENSAPLT00000012356

11676462 - 11784807

108346