Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11835690_11836323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11835690 - 11836323

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TCTGAATGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TGTTTCTGAATG

Flanking Amino Acid:

TGTSGSVLGMALRSCNSSKP

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

65.8

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

64.1

0.32

57.2

42.2

Minor 5ss

44.3

-0.6

2.9

43.7

Minor BPS

65.6

0.35

1.5

68.72

38.9

Associated Gene:

Gene:

ENDOV

Ensembl Gene ID:

ENSAPLG00000003471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027954

11829219 - 11840283

11065

ENSAPLT00000003543

11828658 - 11840283

11626