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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11846484_11847249_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11846484 - 11847249

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TACTTTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

CTATGCATACTT

Flanking Amino Acid:

HRSLPGFQTFGHNEDRTQTG

Intron Amino Acid Position:

3558

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.4

41.2

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

76.1

0.59

73.1

36.9

Minor 5ss

0.64

2.2

73.3

43.5

Minor BPS

44.9

-0.3

2.2

65.19

45.6

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622