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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11850485_11850759_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11850485 - 11850759

Intron Length:

275

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

ATGTCCACAATG

Flanking Amino Acid:

WVFPAEILQQVQSSQSNHID

Intron Amino Acid Position:

3326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

49.8

-0.1

1.9

59.21

42.6

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061