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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11854867_11854977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11854867 - 11854977

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AGTCATTTAACT

Flanking Amino Acid:

VKKYTLLLAKCFQRDSDMKT

Intron Amino Acid Position:

2971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

74.1

38.3

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

93.8

0.98

0.5

92.8

16.7

Minor 5ss

37.2

-1.4

48.3

Minor BPS

64.9

0.54

1.5

78.07

37.5

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061