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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11857348_11861774_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11857348 - 11861774

Intron Length:

4427

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTAACAAA

5'SS Class:

major

3'SS Sequence:

CACCACTGGCTAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

AGCATATTGACA

Flanking Amino Acid:

MQHSPHSEAQLAYSSPLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.42

1.3

59.5

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

49.8

-0

42.4

37.9

Minor 5ss

24.1

-3

3.6

31.2

42.5

Minor BPS

47.8

-0.1

1.6

54.91

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026023

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019846

11857323 - 11863701

6379