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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11857804_11858846_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11857804 - 11858846

Intron Length:

1043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTTGATCTCATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TGTTACTAACCT

Flanking Amino Acid:

LSALQEAGTFSSQTEIILVQ

Intron Amino Acid Position:

2700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

74.9

0.56

0.9

69.3

36.7

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

52.1

0.15

2.1

77.67

44.4

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002987

11839368 - 11879989

40622