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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11858983_11859898_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11858983 - 11859898

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTTTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

TTGAAGAGAAAA

Flanking Amino Acid:

SFLSKEDVLKASFLKITKAR

Intron Amino Acid Position:

2655

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

80.6

31.9

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

81.1

0.7

0.9

73.5

41.9

Minor 5ss

41.4

-1

3.1

45.7

Minor BPS

35.4

-1.1

2.3

48.72

40.8

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061