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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11861011_11861807_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11861011 - 11861807

Intron Length:

797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACCA

5'SS Class:

strong_major

3'SS Sequence:

ACCTTGGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTCTAATAACA

Flanking Amino Acid:

TISQMLCEDSALPANGEEEE

Intron Amino Acid Position:

2580

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

67.7

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

71.9

0.49

64.7

40.8

Minor 5ss

31.6

-2.1

3.1

40.3

45.3

Minor BPS

0.18

1.9

75.11

35.4

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622