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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11861919_11862507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11861919 - 11862507

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGTGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

CGCACAATGATT

Flanking Amino Acid:

GGTSYVGFHGGLWQSVHIDD

Intron Amino Acid Position:

2543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

83.9

30.3

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

65.4

0.35

57.3

43.3

Minor 5ss

39.3

-1.2

3.3

57.3

47.4

Minor BPS

42.7

-0.4

1.8

54.64

41.1

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622