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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11862627_11863018_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11862627 - 11863018

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

GGTCTGTCAACA

Flanking Amino Acid:

SQNAQLIASAKYTVVNEINK

Intron Amino Acid Position:

2503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

63.3

0.33

1.2

39.8

Major PPT

84.4

0.77

0.8

79.6

32.4

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

45.7

-0.3

2.2

58.57

40.6

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061