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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11868835_11869231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11868835 - 11869231

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

TTTCTATTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TTTCTATTAATA

Flanking Amino Acid:

MIFHFDITSSVQSGVPEFLF

Intron Amino Acid Position:

1178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

74.8

35.3

Major BPS

0.3

62.3

30.4

Major PPT

77.4

0.62

0.9

74.4

34.1

Minor 5ss

38.2

-1.3

2.7

49.5

40.3

Minor BPS

66.7

0.52

1.5

77.76

32.3

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061