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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11869426_11871052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11869426 - 11871052

Intron Length:

1627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

TTTATGATAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

TTTATGATAACA

Flanking Amino Acid:

GIVSSRRAGVGKSLYVRRLH

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

84.6

0.86

41.2

Major PPT

72.2

0.5

66.9

42.7

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

49.5

-0

2.3

72.68

39.1

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061