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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11876505_11877047_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11876505 - 11877047

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTCTG

5'SS Class:

major

3'SS Sequence:

GTTTATTGAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GTTTATTGAACA

Flanking Amino Acid:

PDIKHVFSFSGRNTKLLEQL

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

67.1

43.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.45

1.1

65.9

Minor 5ss

44.1

-0.6

2.8

55.2

43.3

Minor BPS

62.5

0.39

1.6

74.35

36.6

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002987

11839368 - 11879989

40622

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061