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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11877731_11878546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11877731 - 11878546

Intron Length:

816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTATGGGGA

5'SS Class:

major

3'SS Sequence:

TTTTACCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TTCTCTTTTACC

Flanking Amino Acid:

LADLERRIQAEPPVNQILVY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

Major BPS

74.2

0.6

39.4

Major PPT

80.3

0.68

0.8

29.9

Minor 5ss

35.2

-1.7

3.5

46.1

49.1

Minor BPS

70.4

0.62

1.6

78.35

37.7

Associated Gene:

Gene:

RNF213

Ensembl Gene ID:

ENSAPLG00000002904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042754

11838929 - 11879989

41061

ENSAPLT00000037030

11838929 - 11879989

41061

ENSAPLT00000030458

11838929 - 11879989

41061

ENSAPLT00000002987

11839368 - 11879989

40622