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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11908671_11909358_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11908671 - 11909358

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TGACAAACGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTGACA

Flanking Amino Acid:

AMRAEIHRMQVRYGQLMKQQ

Intron Amino Acid Position:

318

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

51.7

0.04

1.1

44.9

Minor 5ss

36.2

-1.6

2.9

44.9

36.9

Minor BPS

70.2

0.63

1.2

78.33

31.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002164

11906986 - 11919714

12729