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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11913912_11914680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11913912 - 11914680

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCCTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TGATTTTCCATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

71.3

40.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

84.4

0.77

0.8

81.6

30.4

Minor 5ss

38.5

-1.3

3.4

55.3

48.9

Minor BPS

45.2

-0.3

1.8

55.32

37.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002164

11906986 - 11919714

12729