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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11916354_11917179_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11916354 - 11917179

Intron Length:

826

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTGAG

5'SS Class:

major

3'SS Sequence:

CCTGCCACCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTAAA

U12 Branch Point Sequence:

TTTTTGGTAAAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

68.4

38.7

Major BPS

60.1

0.25

1.3

61.7

43.1

Major PPT

0.34

0.9

54.7

35.1

Minor 5ss

32.1

-2

3.1

39.6

46.4

Minor BPS

48.2

-0

2.6

80.39

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002164

11906986 - 11919714

12729