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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11917572_11918056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11917572 - 11918056

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGAAGT

5'SS Class:

major

3'SS Sequence:

ACTTCTTTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAA

U12 Branch Point Sequence:

ACTTCTTTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

73.6

36.9

Major BPS

0.72

80.3

31.7

Major PPT

85.8

0.81

0.8

79.9

31.4

Minor 5ss

32.2

-2

3.1

45.1

42.8

Minor BPS

66.8

0.52

1.6

73.19

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002164

11906986 - 11919714

12729