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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11918535_11919699_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11918535 - 11919699

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTCACGGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTCTATTTCACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.2

39.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

62.1

0.27

54.4

41.1

Minor 5ss

-2.5

33.4

41.6

Minor BPS

-0

63.66

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002164

11906986 - 11919714

12729