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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11940847_11941675_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11940847 - 11941675

Intron Length:

829

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAACGTCT

5'SS Class:

major

3'SS Sequence:

TTTTGTCCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAA

U12 Branch Point Sequence:

TTTTGTCCCACA

Flanking Amino Acid:

GQMRSLRLFFSDEACTCGQL

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.2

73.1

38.8

Major BPS

58.9

0.22

49.8

35.1

Major PPT

82.4

0.73

0.8

76.9

Minor 5ss

44.9

-0.5

3.2

65.7

45.4

Minor BPS

41.8

-0.6

2.5

63.87

42.8

Associated Gene:

Gene:

TBC1D16

Ensembl Gene ID:

ENSAPLG00000014159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014781

11921081 - 11949951

28871

ENSAPLT00000008336

11921081 - 11949951

28871