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Intron Name: Anas_platyrhynchos_platyrhynchos_19_11943058_11943751_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11943058 - 11943751

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CCAGTCATAACT

Flanking Amino Acid:

QVEEEYKLQKAIFFGGIDIS

Intron Amino Acid Position:

441

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

84.2

0.77

0.7

76.2

32.4

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

49.9

0.07

1.8

64.76

45.7

Associated Gene:

Gene:

TBC1D16

Ensembl Gene ID:

ENSAPLG00000014159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014781

11921081 - 11949951

28871

ENSAPLT00000008336

11921081 - 11949951

28871