About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_11979493_11980375_R

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
11979493 - 11980375
Intron Length:
883

Sequence Information:

Terminal Dinucleotides:
GC-AG
5'SS Sequence:
CAG|GCAAGTGGG
5'SS Class:
strong_major
3'SS Sequence:
TCTTCACTAACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTCAC
U12 Branch Point Sequence:
TCTTCACTAACA
Flanking Amino Acid:
LPIWITAQRQGLKTGSIYFP
Intron Amino Acid Position:
141

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
98.2
1.14
0.7
81.3
35.9
Major BPS
77.5
0.68
1
79.6
33
Major PPT
75.4
0.57
0.9
70.4
33.9
Minor 5ss
21.8
-3.3
3.8
31.5
42.8
Minor BPS
62.2
0.38
2
77.54
38.9

Associated Gene:

Gene:
ENPP7
Ensembl Gene ID:
ENSAPLG00000021105
Chromosome:
19

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000029970
11976730 - 11981891
5162