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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12046519_12110906_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12046519 - 12110906

Intron Length:

64388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGATTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

72.9

44.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.2

0.7

80.7

31.3

Minor 5ss

36.8

-1.5

3.2

49.6

46.6

Minor BPS

69.4

0.69

1.2

79.64

37.1

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033600

12046401 - 12143613

97213