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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12110952_12121527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12110952 - 12121527

Intron Length:

10576

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGAGA

5'SS Class:

strong_major

3'SS Sequence:

ACACCCTTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

TCTCTCTCACAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.8

42.4

Major BPS

72.7

0.56

30.1

Major PPT

72.8

0.51

0.9

65.5

35.1

Minor 5ss

30.6

-2.2

3.3

40.1

45.6

Minor BPS

45.7

-0.3

1.9

56.83

41.6

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033600

12046401 - 12143613

97213