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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12121873_12136070_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12121873 - 12136070

Intron Length:

14198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGTAAG

U12 Branch Point Sequence:

CAGCAGGTAAGG

Flanking Amino Acid:

CPPAFLYLQQGNQDATAPPD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

Major BPS

44.7

-0.3

1.6

47.1

44.6

Major PPT

76.4

0.59

0.9

69.4

36.8

Minor 5ss

-1.9

3.2

42.9

44.7

Minor BPS

30.3

-1.6

2.5

30.24

41.1

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040401

12121528 - 12143098

21571

ENSAPLT00000033600

12046401 - 12143613

97213