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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12138450_12139599_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12138450 - 12139599

Intron Length:

1150

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTCAGA

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

AGGCGCTGAGCT

Flanking Amino Acid:

GTIVEGRKIEVNNATARVMT

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.1

42.6

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

78.6

0.64

0.7

76.4

25.7

Minor 5ss

32.3

-2

40.6

45.1

Minor BPS

43.2

-0.4

57.94

44.3

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040401

12121528 - 12143098

21571

ENSAPLT00000033711

12113292 - 12142549

29258

ENSAPLT00000033600

12046401 - 12143613

97213

ENSAPLT00000023129

12113292 - 12143750

30459