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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12139985_12140279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12139985 - 12140279

Intron Length:

295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGAAAT

U12 Branch Point Sequence:

TGCTGCAGAAAT

Flanking Amino Acid:

GAVYGPEFYAVTGFPYPATG

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.1

75.3

40.8

Major BPS

48.8

-0

1.2

54.6

37.8

Major PPT

75.9

0.58

0.8

69.5

31.2

Minor 5ss

42.4

-0.8

2.9

60.3

Minor BPS

-0.3

2.2

64.15

45.3

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040401

12121528 - 12143098

21571

ENSAPLT00000033711

12113292 - 12142549

29258

ENSAPLT00000033600

12046401 - 12143613

97213