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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12141121_12141771_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12141121 - 12141771

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CCCACCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TCTCCCCCACCA

Flanking Amino Acid:

QDGFYGAEIYGGYAAYRYAQ

Intron Amino Acid Position:

310

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

1.3

35.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

66.3

0.37

0.9

58.2

31.4

Minor 5ss

34.4

-1.8

3.1

40.8

38.7

Minor BPS

45.7

-0.3

2.1

61.96

43.8

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040401

12121528 - 12143098

21571

ENSAPLT00000033600

12046401 - 12143613

97213