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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12141834_12142126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12141834 - 12142126

Intron Length:

293

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCACC

5'SS Class:

major

3'SS Sequence:

TGTTTGCTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAC

U12 Branch Point Sequence:

GGGTCTCTAACA

Flanking Amino Acid:

PAAAAAAYSDSYGRVYAAAD

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.71

69.7

41.3

Major BPS

72.3

0.55

73.3

28.9

Major PPT

0.54

0.9

66.1

40.8

Minor 5ss

39.3

-1.2

3.1

52.3

44.6

Minor BPS

57.9

0.24

1.7

65.7

40.5

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040401

12121528 - 12143098

21571

ENSAPLT00000033600

12046401 - 12143613

97213