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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12142206_12143610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12142206 - 12143610

Intron Length:

1405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTGTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGCGAC

U12 Branch Point Sequence:

GCTCCAGCGACA

Flanking Amino Acid:

PRRHVQHRHHVKLQPFPSGT

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.7

37.6

Major BPS

41.5

-0.5

1.2

31.2

32.8

Major PPT

78.4

0.64

0.9

73.4

37.1

Minor 5ss

36.8

-1.5

3.3

44.7

44.3

Minor BPS

39.4

-0.8

2.3

50.33

40.5

Associated Gene:

Gene:

RBFOX3

Ensembl Gene ID:

ENSAPLG00000029113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033600

12046401 - 12143613

97213

ENSAPLT00000023129

12113292 - 12143750

30459