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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12193452_12193632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12193452 - 12193632

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTGTCTTCAACG

Flanking Amino Acid:

VEYRIKISFRVNREIVSGLK

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

78.2

0.7

79.9

32.6

Major PPT

0.74

0.8

77.2

31.6

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

60.6

0.19

1.7

63.1

45.1

Associated Gene:

Gene:

ARHGDIA

Ensembl Gene ID:

ENSAPLG00000017298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035429

12191211 - 12194798

3588

ENSAPLT00000019743

12191211 - 12194818

3608