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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12193710_12194305_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12193710 - 12194305

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGAAA

U12 Branch Point Sequence:

GGACCCCGAATC

Flanking Amino Acid:

APGPLELDLTGDLESYKKQA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

-0.1

1.3

56.1

37.3

Major PPT

84.6

0.78

0.7

79.4

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

45.9

-0.3

1.7

52.86

37.5

Associated Gene:

Gene:

ARHGDIA

Ensembl Gene ID:

ENSAPLG00000017298

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035429

12191211 - 12194798

3588

ENSAPLT00000019743

12191211 - 12194818

3608