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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12207903_12208142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12207903 - 12208142

Intron Length:

240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

GTCTCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GTCCTGTTGATG

Flanking Amino Acid:

ARPPVLPRTAAPCVMDVAPE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

75.3

34.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

76.9

0.6

0.8

69.9

30.9

Minor 5ss

-2.1

2.6

39.1

38.9

Minor BPS

44.2

-0.6

47.61

40.2

Associated Gene:

Gene:

NPB

Ensembl Gene ID:

ENSAPLG00000022175

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043157

12206997 - 12208333

1337