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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12262021_12262130_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12262021 - 12262130

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TCTGATACAACC

Flanking Amino Acid:

ACLSHEIITRNHWTDIQVKG

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

26.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

90.6

0.91

0.7

88.7

28.3

Minor 5ss

30.6

-2.2

3.3

40.3

40.1

Minor BPS

43.6

-0.5

56.21

42.3

Associated Gene:

Gene:

NOTUM

Ensembl Gene ID:

ENSAPLG00000015427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037340

12259389 - 12268200

8812

ENSAPLT00000016080

12261714 - 12265342

3629