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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12262179_12262673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12262179 - 12262673

Intron Length:

495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AAATCCTAATCC

Flanking Amino Acid:

RELRNTLKDVTASFAPACLS

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

1.3

81.8

38.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

41.5

-0.9

3.1

58.6

39.2

Minor BPS

51.8

0.04

1.9

63.06

Associated Gene:

Gene:

NOTUM

Ensembl Gene ID:

ENSAPLG00000015427

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037340

12259389 - 12268200

8812

ENSAPLT00000016080

12261714 - 12265342

3629