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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12296842_12299955_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12296842 - 12299955

Intron Length:

3114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTTCC

5'SS Class:

strong_major

3'SS Sequence:

CCCATGTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTCCCATGTATC

Flanking Amino Acid:

RKRLAQLQSERKRLEEAPLL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.8

1.08

0.7

84.9

25.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

62.4

0.28

53.7

40.6

Minor 5ss

41.5

-0.9

2.7

53.7

43.5

Minor BPS

44.7

-0.4

58.19

40.4

Associated Gene:

Gene:

LRRC45

Ensembl Gene ID:

ENSAPLG00000015594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041920

12273201 - 12339085

65885

ENSAPLT00000016161

12273201 - 12337971

64771