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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12300038_12300914_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12300038 - 12300914

Intron Length:

877

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCCTTT

5'SS Class:

weak_major

3'SS Sequence:

CTTCTGAGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

ACTAACTTAATG

Flanking Amino Acid:

MKEKIERYPKVVLRVHFPDR

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.2

69.7

43.7

Major BPS

78.2

0.7

77.9

32.1

Major PPT

66.6

0.37

58.6

41.8

Minor 5ss

63.8

0.47

2.8

81.8

38.5

Minor BPS

57.7

0.1

1.6

59.57

42.3

Associated Gene:

Gene:

LRRC45

Ensembl Gene ID:

ENSAPLG00000015594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041920

12273201 - 12339085

65885

ENSAPLT00000016161

12273201 - 12337971

64771