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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12300982_12302001_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12300982 - 12302001

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TCCTTTTTTACA

Flanking Amino Acid:

LQGFFRPSETVGILRDFVRS

Intron Amino Acid Position:

388

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.6

38.4

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

90.9

0.92

0.6

86.5

24.5

Minor 5ss

32.3

-2

3.5

44.3

45.4

Minor BPS

58.1

0.25

1.6

65.81

41.1

Associated Gene:

Gene:

LRRC45

Ensembl Gene ID:

ENSAPLG00000015594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041920

12273201 - 12339085

65885

ENSAPLT00000016161

12273201 - 12337971

64771