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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12321588_12327687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12321588 - 12327687

Intron Length:

6100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGAAAT

5'SS Class:

major

3'SS Sequence:

TTTCCCTACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TTTTCCCTACCC

Flanking Amino Acid:

MNYLRICVKLLLHGLC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

75.5

33.6

Major BPS

65.7

0.39

71.3

30.3

Major PPT

0.61

0.8

69.9

35.6

Minor 5ss

37.7

-1.4

3.2

55.5

42.8

Minor BPS

66.4

0.49

83.46

36.2

Associated Gene:

Gene:

LRRC45

Ensembl Gene ID:

ENSAPLG00000015594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026244

12319377 - 12337971

18595

ENSAPLT00000016291

12321569 - 12339085

17517