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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12337053_12337146_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12337053 - 12337146

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGTGTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TAATCATTTATT

Flanking Amino Acid:

LRRRIEELQQDLNSKEQEKV

Intron Amino Acid Position:

987

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

71.6

40.9

Major BPS

80.4

0.76

80.3

31.8

Major PPT

73.2

0.52

1.1

72.6

42.4

Minor 5ss

39.7

-1.2

2.8

50.2

Minor BPS

56.1

0.27

1.9

75.44

Associated Gene:

Gene:

LRRC45

Ensembl Gene ID:

ENSAPLG00000015594

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041920

12273201 - 12339085

65885

ENSAPLT00000026244

12319377 - 12337971

18595

ENSAPLT00000016291

12321569 - 12339085

17517

ENSAPLT00000016161

12273201 - 12337971

64771