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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12345958_12346051_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12345958 - 12346051

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTGGTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTATAT

U12 Branch Point Sequence:

GTTTGGTTATAT

Flanking Amino Acid:

VMAMELGPYKIRVNTVNPTV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.9

34.8

Major BPS

61.5

0.29

1.3

45.5

Major PPT

78.2

0.63

0.9

76.1

37.8

Minor 5ss

41.1

-1

3.4

58.5

46.3

Minor BPS

43.9

-0.3

2.6

69.79

46.6

Associated Gene:

Gene:

RFNG

Ensembl Gene ID:

ENSAPLG00000016029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026270

12345201 - 12354385

9185

ENSAPLT00000016730

12345009 - 12348608

3600