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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12346382_12346687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12346382 - 12346687

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CCTGTTATGATT

Flanking Amino Acid:

NLRAVLHVSQIVARQMITQG

Intron Amino Acid Position:

119

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

84.6

0.86

41.2

Major PPT

94.3

0.5

93.3

15.5

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

45.3

-0.2

1.6

57.94

40.3

Associated Gene:

Gene:

RFNG

Ensembl Gene ID:

ENSAPLG00000016029

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026270

12345201 - 12354385

9185

ENSAPLT00000016730

12345009 - 12348608

3600