Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_12378287_12378650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12378287 - 12378650

Intron Length:

364

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAAGA

5'SS Class:

major

3'SS Sequence:

CTCTACGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

CTGACTTTATCT

Flanking Amino Acid:

VNRELKLRCQEEIANQKEGE

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.2

62.8

43.6

Major BPS

75.1

0.62

65.6

Major PPT

72.5

0.51

0.9

65.3

35.8

Minor 5ss

37.3

-1.4

3.1

49.9

Minor BPS

57.8

0.32

1.7

72.07

45.1

Associated Gene:

Gene:

DUS1L

Ensembl Gene ID:

ENSAPLG00000001965

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002078

12375630 - 12387608

11979