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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12401354_12401643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12401354 - 12401643

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTGTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GGTGGTTTGATT

Flanking Amino Acid:

GKHIGKVMIKVQEEEKQYPL

Intron Amino Acid Position:

1860

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

61.1

0.25

1.2

63.7

41.9

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

47.8

-0

1.9

63.67

41.4

Associated Gene:

Gene:

FASN

Ensembl Gene ID:

ENSAPLG00000002703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002873

12392579 - 12428868

36290