Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_19_12420922_12423683_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12420922 - 12423683

Intron Length:

2762

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACATGT

5'SS Class:

major

3'SS Sequence:

TTCTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACATAAT

U12 Branch Point Sequence:

GAGCACATAATA

Flanking Amino Acid:

PASGLAALAKVVLSLEHGLW

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

1.1

72.5

39.9

Major BPS

66.4

0.41

1.1

66.3

36.5

Major PPT

85.1

0.79

0.8

76.9

37.4

Minor 5ss

45.2

-0.5

65.7

45.3

Minor BPS

46.4

-0.2

1.7

53.35

38.1

Associated Gene:

Gene:

FASN

Ensembl Gene ID:

ENSAPLG00000002703

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002873

12392579 - 12428868

36290