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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12480108_12480517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12480108 - 12480517

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTGCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAA

U12 Branch Point Sequence:

TTTATCTTAACA

Flanking Amino Acid:

SILLAMLYGTGPLCSVCVNR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

81.8

38.5

Major BPS

73.4

0.58

0.9

63.7

35.1

Major PPT

74.4

0.55

0.9

Minor 5ss

36.1

-1.6

3.1

51.1

45.4

Minor BPS

82.9

1.03

1.1

87.91

29.1

Associated Gene:

Gene:

SLC16A3

Ensembl Gene ID:

ENSAPLG00000004860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038225

12479864 - 12484316

4453

ENSAPLT00000005015

12479864 - 12488639

8776