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Intron Name: Anas_platyrhynchos_platyrhynchos_19_12480662_12481049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12480662 - 12481049

Intron Length:

388

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CATTCTATTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TTTTTTGTACAT

Flanking Amino Acid:

QIYLTAGVITGLGLALNFQP

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

79.9

0.67

0.9

73.2

35.6

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

47.9

-0

2.3

75.95

41.3

Associated Gene:

Gene:

SLC16A3

Ensembl Gene ID:

ENSAPLG00000004860

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005015

12479864 - 12488639

8776

ENSAPLT00000038225

12479864 - 12484316

4453